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» Semantic Web Technologies for Interpreting DNA Microarray An...
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WISE
2005
Springer
15 years 3 months ago
Semantic Web Technologies for Interpreting DNA Microarray Analyses: The MEAT System
Abstract. This paper describes MEAT (Memory of Experiments for the Analysis of Transcriptomes), a project aiming at supporting biologists working on DNA microarrays. We provide met...
Khaled Khelif, Rose Dieng-Kuntz, Pascal Barbry
JUCS
2007
106views more  JUCS 2007»
14 years 10 months ago
An Ontology-based Approach to Support Text Mining and Information Retrieval in the Biological Domain
: This paper describes an ontology-based approach aiming at helping biologists to annotate their documents and at facilitating their information retrieval task. Our approach, based...
Khaled Khelif, Rose Dieng-Kuntz, Pascal Barbry
83
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BMCBI
2005
103views more  BMCBI 2005»
14 years 10 months ago
MicroGen: a MIAME compliant web system for microarray experiment information and workflow management
Background: Improvements of bio-nano-technologies and biomolecular techniques have led to increasing production of high-throughput experimental data. Spotted cDNA microarray is on...
Sarah Burgarella, Dario Cattaneo, Francesco Pincir...
BMCBI
2008
115views more  BMCBI 2008»
14 years 10 months ago
Probe signal correction for differential methylation hybridization experiments
Background: Non-biological signal (or noise) has been the bane of microarray analysis. Hybridization effects related to probe-sequence composition and DNA dye-probe interactions h...
Dustin P. Potter, Pearlly Yan, Tim Hui-Ming Huang,...
110
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BMCBI
2011
14 years 5 months ago
Investigating the effect of paralogs on microarray gene-set analysis
Background: In order to interpret the results obtained from a microarray experiment, researchers often shift focus from analysis of individual differentially expressed genes to an...
Andre J. Faure, Cathal Seoighe, Nicola J. Mulder