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» Separating Complexity Classes Using Structural Properties
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BIBE
2006
IEEE
184views Bioinformatics» more  BIBE 2006»
15 years 5 months ago
A Language Modeling Text Mining Approach to the Annotation of Protein Community
This paper discusses an ontology based language modeling text mining approach to the annotation of protein community. Communities appear to play an important role in the functional...
Xiaodan Zhang, Daniel Duanqing Wu, Xiaohua Zhou, X...
CONCUR
2001
Springer
15 years 3 months ago
Extended Temporal Logic Revisited
A key issue in the design of a model-checking tool is the choice of the formal language with which properties are specified. It is now recognized that a good language should exten...
Orna Kupferman, Nir Piterman, Moshe Y. Vardi
FUZZIEEE
2007
IEEE
15 years 5 months ago
Mining and Predicting CpG islands
— A DNA sequence can be described as a string composed of four symbols: A, T, C and G. Each symbol represents a chemically distinct nucleotide molecule. Combinations of two nucle...
Christopher Previti, Oscar Harari, Coral del Val
WABI
2007
Springer
102views Bioinformatics» more  WABI 2007»
15 years 5 months ago
Homology Search with Fragmented Nucleic Acid Sequence Patterns
The comprehensive annotation of non-coding RNAs in newly sequenced genomes is still a largely unsolved problem because many functional RNAs exhibit not only poorly conserved sequen...
Axel Mosig, Julian J.-L. Chen, Peter F. Stadler
PEPM
2009
ACM
15 years 8 months ago
Bidirectional data-flow analyses, type-systematically
We show that a wide class of bidirectional data-flow analyses and program optimizations based on them admit declarative descriptions in the form of type systems. The salient feat...
Maria João Frade, Ando Saabas, Tarmo Uustal...