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87
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RECOMB
2010
Springer
15 years 8 months ago
Dense Subgraphs with Restrictions and Applications to Gene Annotation Graphs
Abstract. In this paper, we focus on finding complex annotation patterns representing novel and interesting hypotheses from gene annotation data. We define a generalization of th...
Barna Saha, Allison Hoch, Samir Khuller, Louiqa Ra...
101
Voted
SENSYS
2005
ACM
15 years 6 months ago
TSAR: a two tier sensor storage architecture using interval skip graphs
Archival storage of sensor data is necessary for applications that query, mine, and analyze such data for interesting features and trends. We argue that existing storage systems a...
Peter Desnoyers, Deepak Ganesan, Prashant J. Sheno...
100
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BMCBI
2006
184views more  BMCBI 2006»
15 years 1 months ago
PathSys: integrating molecular interaction graphs for systems biology
Background: The goal of information integration in systems biology is to combine information from a number of databases and data sets, which are obtained from both high and low th...
Michael Baitaluk, Xufei Qian, Shubhada Godbole, Al...
121
Voted
PKDD
2010
Springer
178views Data Mining» more  PKDD 2010»
14 years 11 months ago
Graph Regularized Transductive Classification on Heterogeneous Information Networks
A heterogeneous information network is a network composed of multiple types of objects and links. Recently, it has been recognized that strongly-typed heterogeneous information net...
Ming Ji, Yizhou Sun, Marina Danilevsky, Jiawei Han...
ISBRA
2009
Springer
15 years 8 months ago
Querying Protein-Protein Interaction Networks
Recent techniques increase the amount of our knowledge of interactions between proteins. To filter, interpret and organize this data, many authors have provided tools for querying...
Guillaume Blin, Florian Sikora, Stéphane Vi...