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» Sequence Comparison Using a Relational Database Approach
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BMCBI
2006
167views more  BMCBI 2006»
15 years 2 months ago
The bovine QTL viewer: a web accessible database of bovine Quantitative Trait Loci
Background: Many important agricultural traits such as weight gain, milk fat content and intramuscular fat (marbling) in cattle are quantitative traits. Most of the information on...
Pavana Polineni, Prathyusha Aragonda, Suresh R. Xa...
126
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EMNLP
2010
15 years 18 days ago
Confidence in Structured-Prediction Using Confidence-Weighted Models
Confidence-Weighted linear classifiers (CW) and its successors were shown to perform well on binary and multiclass NLP problems. In this paper we extend the CW approach for sequen...
Avihai Mejer, Koby Crammer
BMCBI
2010
96views more  BMCBI 2010»
15 years 2 months ago
sdef: an R package to synthesize lists of significant features in related experiments
Background: In microarray studies researchers are often interested in the comparison of relevant quantities between two or more similar experiments, involving different treatments...
Marta Blangiardo, Alberto Cassese, Sylvia Richards...
147
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BMCBI
2008
204views more  BMCBI 2008»
15 years 2 months ago
EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Javier Forment, Francisco Gilabert Villamón...
123
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BMCBI
2005
159views more  BMCBI 2005»
15 years 2 months ago
Columba: an integrated database of proteins, structures, and annotations
Background: Structural and functional research often requires the computation of sets of protein structures based on certain properties of the proteins, such as sequence features,...
Silke Trißl, Kristian Rother, Heiko Mül...