Recent approaches of graph comparison consider graphs as sets of paths [6, 5]. Kernels on graphs are then computed from kernels on paths. A common strategy for graph retrieval is ...
On-Line Analytical Processing (OLAP) is a trend in database technology, which was recently introduced and has attracted the interest of a lot of research work. OLAP is based on th...
Background: A fundamental problem when trying to define the functional relationships between proteins is the difficulty in quantifying functional similarities, even when well-stru...
Angela del Pozo, Florencio Pazos, Alfonso Valencia
—Unknown protein sequences are often compared to a set of known sequences (a database scan) to detect functional similarities. Even though efficient dynamic programming algorithm...
Timothy F. Oliver, Bertil Schmidt, Douglas L. Mask...
MALISAM (manual alignments for structurally analogous motifs) represents the first database containing pairs of structural analogs and their alignments. To find reliable analogs, ...