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» Sequence Comparison Using a Relational Database Approach
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ICPR
2010
IEEE
15 years 8 months ago
Kernel on Graphs Based on Dictionary of Paths for Image Retrieval
Recent approaches of graph comparison consider graphs as sets of paths [6, 5]. Kernels on graphs are then computed from kernels on paths. A common strategy for graph retrieval is ...
Jean-Emmanuel Haugeard, Sylvie Philipp-Foliguet, P...
SSDBM
1998
IEEE
141views Database» more  SSDBM 1998»
15 years 9 months ago
Modeling Multidimensional Databases, Cubes and Cube Operations
On-Line Analytical Processing (OLAP) is a trend in database technology, which was recently introduced and has attracted the interest of a lot of research work. OLAP is based on th...
Panos Vassiliadis
BMCBI
2008
200views more  BMCBI 2008»
15 years 5 months ago
Defining functional distances over Gene Ontology
Background: A fundamental problem when trying to define the functional relationships between proteins is the difficulty in quantifying functional similarities, even when well-stru...
Angela del Pozo, Florencio Pazos, Alfonso Valencia
ISCAS
2005
IEEE
129views Hardware» more  ISCAS 2005»
15 years 10 months ago
A reconfigurable architecture for scanning biosequence databases
—Unknown protein sequences are often compared to a set of known sequences (a database scan) to detect functional similarities. Even though efficient dynamic programming algorithm...
Timothy F. Oliver, Bertil Schmidt, Douglas L. Mask...
NAR
2008
119views more  NAR 2008»
15 years 5 months ago
MALISAM: a database of structurally analogous motifs in proteins
MALISAM (manual alignments for structurally analogous motifs) represents the first database containing pairs of structural analogs and their alignments. To find reliable analogs, ...
Hua Cheng, Bong-Hyun Kim, Nick V. Grishin