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» Sequence Comparison Using a Relational Database Approach
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BMCBI
2004
134views more  BMCBI 2004»
15 years 6 months ago
Bayesian model accounting for within-class biological variability in Serial Analysis of Gene Expression (SAGE)
Background: An important challenge for transcript counting methods such as Serial Analysis of Gene Expression (SAGE), "Digital Northern" or Massively Parallel Signature ...
Ricardo Z. N. Vêncio, Helena Brentani, Diogo...
PKDD
2009
Springer
135views Data Mining» more  PKDD 2009»
16 years 29 days ago
Syntactic Structural Kernels for Natural Language Interfaces to Databases
A core problem in data mining is to retrieve data in a easy and human friendly way. Automatically translating natural language questions into SQL queries would allow for the design...
Alessandra Giordani, Alessandro Moschitti
BMCBI
2008
128views more  BMCBI 2008»
15 years 6 months ago
Pairwise covariance adds little to secondary structure prediction but improves the prediction of non-canonical local structure
Background: Amino acid sequence probability distributions, or profiles, have been used successfully to predict secondary structure and local structure in proteins. Profile models ...
Christopher Bystroff, Bobbie-Jo M. Webb-Robertson
BMCBI
2008
123views more  BMCBI 2008»
15 years 6 months ago
Validation of protein models by a neural network approach
Background: The development and improvement of reliable computational methods designed to evaluate the quality of protein models is relevant in the context of protein structure re...
Paolo Mereghetti, Maria Luisa Ganadu, Elena Papale...
NIPS
2000
15 years 7 months ago
Text Classification using String Kernels
We propose a novel approach for categorizing text documents based on the use of a special kernel. The kernel is an inner product in the feature space generated by all subsequences...
Huma Lodhi, John Shawe-Taylor, Nello Cristianini, ...