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» Sequence Comparison Using a Relational Database Approach
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RECOMB
2008
Springer
16 years 6 months ago
A Fast, Alignment-Free, Conservation-Based Method for Transcription Factor Binding Site Discovery
As an increasing number of eukaryotic genomes are being sequenced, comparative studies aimed at detecting regulatory elements in intergenic sequences are becoming more prevalent. M...
Raluca Gordân, Leelavati Narlikar, Alexander...
BMCBI
2006
108views more  BMCBI 2006»
15 years 6 months ago
SPIDer: Saccharomyces protein-protein interaction database
Background: Since proteins perform their functions by interacting with one another and with other biomolecules, reconstructing a map of the protein-protein interactions of a cell,...
Xiaomei Wu, Lei Zhu, Jie Guo, Cong Fu, Hongjun Zho...
ICDE
2011
IEEE
234views Database» more  ICDE 2011»
14 years 10 months ago
Massively parallel XML twig filtering using dynamic programming on FPGAs
Abstract— In recent years, XML-based Publish-Subscribe Systems have become popular due to the increased demand of timely event-notification. Users (or subscribers) pose complex ...
Roger Moussalli, Mariam Salloum, Walid A. Najjar, ...
SIGMOD
2001
ACM
104views Database» more  SIGMOD 2001»
16 years 6 months ago
Querying Multi-dimensional Data Indexed Using the Hilbert Space-filling Curve
Mapping to one-dimensional values and then using a onedimensional indexing method has been proposed as a way of indexing multi-dimensional data. Most previous related work uses th...
Jonathan K. Lawder, Peter J. H. King
DOLAP
1999
ACM
15 years 10 months ago
Updating OLAP Dimensions
OLAP systems support data analysis through a multidimensional data model, according to which data facts are viewed as points in a space of application-related dimensions", or...
Carlos A. Hurtado, Alberto O. Mendelzon, Alejandro...