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» Sequence Comparison Using a Relational Database Approach
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PODS
2010
ACM
213views Database» more  PODS 2010»
15 years 11 months ago
Expressive languages for path queries over graph-structured data
For many problems arising in the setting of graph querying (such as finding semantic associations in RDF graphs, exact and approximate pattern matching, sequence alignment, etc.)...
Pablo Barceló, Carlos A. Hurtado, Leonid Li...
COOPIS
2003
IEEE
15 years 12 months ago
Ontology Based Query Processing in Database Management Systems
The use of semantic knowledge in its various forms has become an important aspect in managing data in database and information systems. In the form of integrity constraints, it ha...
Chokri Ben Necib, Johann Christoph Freytag
BMCBI
2005
100views more  BMCBI 2005»
15 years 6 months ago
Speeding disease gene discovery by sequence based candidate prioritization
Background: Regions of interest identified through genetic linkage studies regularly exceed 30 centimorgans in size and can contain hundreds of genes. Traditionally this number is...
Euan A. Adie, Richard R. Adams, Kathryn L. Evans, ...
BMCBI
2004
154views more  BMCBI 2004»
15 years 6 months ago
Base-By-Base: Single nucleotide-level analysis of whole viral genome alignments
Background: With ever increasing numbers of closely related virus genomes being sequenced, it has become desirable to be able to compare two genomes at a level more detailed than ...
Ryan Brodie, Alex J. Smith, Rachel L. Roper, Vasil...
VLDB
2003
ACM
141views Database» more  VLDB 2003»
16 years 6 months ago
Computing complete answers to queries in the presence of limited access patterns
In data applications such as information integration, there can be limited access patterns to relations, i.e., binding patterns require values to be specified for certain attribut...
Chen Li