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» Sequence Comparison Using a Relational Database Approach
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JASIS
2000
120views more  JASIS 2000»
15 years 6 months ago
Probabilistic datalog: Implementing logical information retrieval for advanced applications
In the logical approach to information retrieval (IR), retrieval is considered as uncertain inference. Whereas classical IR models are based on propositional logic, we combine Dat...
Norbert Fuhr
JCB
2007
146views more  JCB 2007»
15 years 6 months ago
MSOAR: A High-Throughput Ortholog Assignment System Based on Genome Rearrangement
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving variou...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...
SIGMOD
2008
ACM
162views Database» more  SIGMOD 2008»
16 years 6 months ago
Event queries on correlated probabilistic streams
A major problem in detecting events in streams of data is that the data can be imprecise (e.g. RFID data). However, current state-ofthe-art event detection systems such as Cayuga ...
Christopher Ré, Dan Suciu, Julie Letchner, ...
BMCBI
2005
131views more  BMCBI 2005»
15 years 6 months ago
Functional annotation by identification of local surface similarities: a novel tool for structural genomics
Background: Protein function is often dependent on subsets of solvent-exposed residues that may exist in a similar three-dimensional configuration in non homologous proteins thus ...
Fabrizio Ferrè, Gabriele Ausiello, Andreas ...
ICOODB
2010
129views Database» more  ICOODB 2010»
15 years 4 months ago
Solving ORM by MAGIC: MApping GeneratIon and Composition
Object-relational mapping (ORM) technologies have been proposed as a solution for the impedance mismatch problem between object-oriented applications and relational databases. Exis...
David Kensche, Christoph Quix, Xiang Li 0002, Sand...