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» Sequence Comparison Using a Relational Database Approach
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HICSS
2007
IEEE
187views Biometrics» more  HICSS 2007»
15 years 11 months ago
A Service-Oriented Data Integration and Analysis Environment for In Silico Experiments and Bioinformatics Research
In this paper, we present a practical experiment of building a service-oriented system upon current web services technologies and bioinformatics middleware. The system allows scie...
Xiaorong Xiang, Gregory R. Madey, Jeanne Romero-Se...
BMCBI
2006
116views more  BMCBI 2006»
15 years 5 months ago
Optimized mixed Markov models for motif identification
Background: Identifying functional elements, such as transcriptional factor binding sites, is a fundamental step in reconstructing gene regulatory networks and remains a challengi...
Weichun Huang, David M. Umbach, Uwe Ohler, Leping ...
BMCBI
2005
104views more  BMCBI 2005»
15 years 5 months ago
Scoring functions for transcription factor binding site prediction
Background: Transcription factor binding site (TFBS) prediction is a difficult problem, which requires a good scoring function to discriminate between real binding sites and backg...
Markus T. Friberg, Peter von Rohr, Gaston H. Gonne...
BMCBI
2011
14 years 8 months ago
Detection of Lineage-Specific Evolutionary Changes among Primate Species
Background: Comparison of the human genome with other primates offers the opportunity to detect evolutionary events that created the diverse phenotypes among the primate species. ...
Mihaela Pertea, Geo Pertea, Steven L. Salzberg
ER
2009
Springer
119views Database» more  ER 2009»
15 years 11 months ago
Assessing Modal Aspects of OntoUML Conceptual Models in Alloy
Assessing the quality of conceptual models is key to ensure that conceptual models can be used effectively as a basis for understanding, agreement and construction of information ...
Alessander Botti Benevides, Giancarlo Guizzardi, B...