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» Sequence Comparison Using a Relational Database Approach
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BMCBI
2008
135views more  BMCBI 2008»
15 years 5 months ago
Functional site prediction selects correct protein models
Background: The prediction of protein structure can be facilitated by the use of constraints based on a knowledge of functional sites. Without this information it is still possibl...
Vijayalakshmi Chelliah, William R. Taylor
RECOMB
2009
Springer
16 years 5 months ago
Shared Peptides in Mass Spectrometry Based Protein Quantification
In analyzing the proteome using mass spectrometry, the mass values help identify the molecules, and the intensities help quantify them, relative to their abundance in other sample...
Banu Dost, Nuno Bandeira, Xiangqian Li, Zhouxin Sh...
ER
2006
Springer
109views Database» more  ER 2006»
15 years 8 months ago
Oxone: A Scalable Solution for Detecting Superior Quality Deltas on Ordered Large XML Documents
Recently, a number of relational-based approaches for detecting the changes to XML data have been proposed to address the scalability problem of main memory-based approaches (e.g.,...
Erwin Leonardi, Sourav S. Bhowmick
OTM
2009
Springer
15 years 11 months ago
The Constellation Query Language
Collaboration in modeling is essential to success, but ORM diagrams intimidate many business people, and most would never install an ORM modeling tool on their computers. The Const...
Clifford Heath
ACL
2006
15 years 6 months ago
An Effective Two-Stage Model for Exploiting Non-Local Dependencies in Named Entity Recognition
This paper shows that a simple two-stage approach to handle non-local dependencies in Named Entity Recognition (NER) can outperform existing approaches that handle non-local depen...
Vijay Krishnan, Christopher D. Manning