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» Sequence Comparison Using a Relational Database Approach
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101
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ALMOB
2007
151views more  ALMOB 2007»
15 years 17 days ago
Local sequence alignments statistics: deviations from Gumbel statistics in the rare-event tail
Background: The optimal score for ungapped local alignments of infinitely long random sequences is known to follow a Gumbel extreme value distribution. Less is known about the imp...
Stefan Wolfsheimer, Bernd Burghardt, Alexander K. ...
85
Voted
BMCBI
2010
94views more  BMCBI 2010»
15 years 17 days ago
Comparison study of microarray meta-analysis methods
Background: Meta-analysis methods exist for combining multiple microarray datasets. However, there are a wide range of issues associated with microarray meta-analysis and a limite...
Anna Campain, Yee Hwa Yang
89
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LPNMR
1999
Springer
15 years 4 months ago
A Comparison of Sceptical NAF-Free Logic Programming Approaches
Recently there has been increased interest in logic programming-based default reasoning approaches which are not using negation-as-failure in their object language. Instead, defau...
Grigoris Antoniou, Michael J. Maher, David Billing...
APBC
2003
141views Bioinformatics» more  APBC 2003»
15 years 1 months ago
Comparison of Metabolic Pathways using Constraint Graph Drawing
Databases contain a large amount of data about metabolic pathways, in particular about similar pathways in different species. Biologists are familiar with visual representations ...
Falk Schreiber
BIOCOMP
2007
15 years 1 months ago
Quality-Based Similarity Search for Biological Sequence Databases
Low-Complexity Regions (LCRs) of biological sequences are the main source of false positives in similarity searches for biological sequence databases. We consider the problem of ï...
Xuehui Li, Tamer Kahveci