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» Sequence Comparison Using a Relational Database Approach
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85
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SBACPAD
2003
IEEE
120views Hardware» more  SBACPAD 2003»
15 years 5 months ago
Comparison of Genomes Using High-Performance Parallel Computing
Comparison of the DNA sequences and genes of two genomes can be useful to investigate the common functionalities of the corresponding organisms and get a better understanding of h...
Nalvo F. Almeida Jr., Carlos E. R. Alves, Edson C&...
90
Voted
BMCBI
2008
136views more  BMCBI 2008»
15 years 19 days ago
A comparison of machine learning algorithms for chemical toxicity classification using a simulated multi-scale data model
Background: Bioactivity profiling using high-throughput in vitro assays can reduce the cost and time required for toxicological screening of environmental chemicals and can also r...
Richard Judson, Fathi Elloumi, R. Woodrow Setzer, ...
ALMOB
2008
131views more  ALMOB 2008»
15 years 20 days ago
Fast algorithms for computing sequence distances by exhaustive substring composition
The increasing throughput of sequencing raises growing needs for methods of sequence analysis and comparison on a genomic scale, notably, in connection with phylogenetic tree reco...
Alberto Apostolico, Olgert Denas
85
Voted
ADC
2007
Springer
93views Database» more  ADC 2007»
15 years 4 months ago
A Heuristic Approach to Cost-Efficient Derived Horizontal Fragmentation of Complex Value Databases
Derived horizontal fragmentation is one of the main database distribution design techniques. Unlike primary horizontal fragmentation, the decision of derived horizontal fragmentat...
Hui Ma, Klaus-Dieter Schewe, Qing Wang
108
Voted
RECOMB
2004
Springer
16 years 25 days ago
Designing multiple simultaneous seeds for DNA similarity search
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
Yanni Sun, Jeremy Buhler