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» Sequence Comparison Using a Relational Database Approach
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VLDB
2007
ACM
146views Database» more  VLDB 2007»
16 years 23 days ago
A Cost-Estimation Component for Statement Sequences
Query generators producing sequences of SQL statements are embedded in many applications. As the execution time of such sequences is often far from optimal, their optimization is ...
Tobias Kraft
BMCBI
2006
143views more  BMCBI 2006»
15 years 18 days ago
IsoSVM - Distinguishing isoforms and paralogs on the protein level
Background: Recent progress in cDNA and EST sequencing is yielding a deluge of sequence data. Like database search results and proteome databases, this data gives rise to inferred...
Michael Spitzer, Stefan Lorkowski, Paul Cullen, Al...
ICDE
1996
IEEE
142views Database» more  ICDE 1996»
16 years 1 months ago
Approximate Queries and Representations for Large Data Sequences
Many new database application domains such as experimental sciences and medicine are characterized by large sequences as their main form of data. Using approximate representation ...
Hagit Shatkay, Stanley B. Zdonik
DEXAW
2003
IEEE
136views Database» more  DEXAW 2003»
15 years 5 months ago
Ontology Based Semantic Similarity Comparison of Documents
In this work we consider ontologies as knowledge structures that specify terms, their properties and relations among them to enable knowledge extraction from texts. We represent o...
Vladimir A. Oleshchuk, Asle Pedersen
BMCBI
2010
145views more  BMCBI 2010»
15 years 20 days ago
JCoDA: a tool for detecting evolutionary selection
Background: The incorporation of annotated sequence information from multiple related species in commonly used databases (Ensembl, Flybase, Saccharomyces Genome Database, Wormbase...
Steven N. Steinway, Ruth Dannenfelser, Christopher...