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» Sequence Comparisons via Algorithmic Mutual Information
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LION
2009
Springer
114views Optimization» more  LION 2009»
15 years 8 months ago
Substitution Matrices and Mutual Information Approaches to Modeling Evolution
Abstract. Substitution matrices are at the heart of Bioinformatics: sequence alignment, database search, phylogenetic inference, protein family classication are based on Blosum, P...
Stephan Kitchovitch, Yuedong Song, Richard C. van ...
NIPS
2004
15 years 3 months ago
Discrete profile alignment via constrained information bottleneck
Amino acid profiles, which capture position-specific mutation probabilities, are a richer encoding of biological sequences than the individual sequences themselves. However, profi...
Sean O'Rourke, Gal Chechik, Robin Friedman, Eleaza...
BMCBI
2008
97views more  BMCBI 2008»
15 years 1 months ago
Comparison study on k-word statistical measures for protein: From sequence to 'sequence space'
Background: Many proposed statistical measures can efficiently compare protein sequence to further infer protein structure, function and evolutionary information. They share the s...
Qi Dai, Tian-Ming Wang
BILDMED
2009
152views Algorithms» more  BILDMED 2009»
14 years 11 months ago
Triple-Modality Normalized Mutual Information Based Medical Image Registration of Cardiac PET/CT and SPECT Images
Abstract. An extension of the normalized mutual information similarity measurement was proposed to register cardiac PET/CT and SPECT images representing coronary artery disease in ...
Laszlo Papp, Maaz Zuhayra, Reinhard Koch
AAAI
1990
15 years 3 months ago
Parsing a Natural Language Using Mutual Information Statistics
The purpose of this paper is to characterize a constituent boundary parsing algorithm, using an information-theoretic measure called generalized mutual information, which serves a...
David M. Magerman, Mitchell P. Marcus