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» Sequence Complexity for Biological Sequence Analysis
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GECCO
2004
Springer
150views Optimization» more  GECCO 2004»
15 years 3 months ago
Systems Biology Modeling in Human Genetics Using Petri Nets and Grammatical Evolution
Understanding the hierarchical relationships among biochemical, metabolic, and physiological systems in the mapping between genotype and phenotype is expected to improve the diagno...
Jason H. Moore, Lance W. Hahn
CSB
2003
IEEE
15 years 3 months ago
LOGOS: a modular Bayesian model for de novo motif detection
The complexity of the global organization and internal structures of motifs in higher eukaryotic organisms raises significant challenges for motif detection techniques. To achiev...
Eric P. Xing, Wei Wu, Michael I. Jordan, Richard M...
FCS
2006
14 years 11 months ago
Another Algorithm for Computing Longest Common Increasing Subsequence for Two Random Input Sequences
We have previously developed several algorithms which deal with different input sequence scenarios respectively. In this paper, another sequential algorithm for computing Longest ...
Yongsheng Bai, Bob P. Weems
ACST
2006
14 years 11 months ago
PDC: Pattern discovery with confidence in DNA sequences
Pattern discovery in DNA sequences is one of the most challenging tasks in molecular biology and computer science. The main goal of pattern discovery in DNA sequences is to identi...
Yi Lu, Shiyong Lu, Farshad Fotouhi, Yan Sun, Zijia...
COCOA
2007
Springer
15 years 4 months ago
A New Dynamic Programming Algorithm for Multiple Sequence Alignment
Abstract. Multiple sequence alignment (MSA) is one of the most basic and central tasks for many studies in modern biology. In this paper, we present a new progressive alignment alg...
Jean-Michel Richer, Vincent Derrien, Jin-Kao Hao