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» Sequence Complexity for Biological Sequence Analysis
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BIOCOMP
2009
14 years 11 months ago
Improving Remote Homology Detection Using Sequence Properties and Position Specific Scoring Matrices
Current biological sequence comparison tools frequently fail to recognize matches between homologs when sequence similarity is below the twilight zone of less than 25% sequence id...
Gina Cooper, Michael L. Raymer
EGC
2009
Springer
14 years 7 months ago
Discrepancy Analysis of Complex Objects Using Dissimilarities
Abstract. In this article we consider objects for which we have a matrix of dissimilarities and we are interested in their links with covariates. We focus on state sequences for wh...
Matthias Studer, Gilbert Ritschard, Alexis Gabadin...
GI
2009
Springer
14 years 7 months ago
AnToNIa: A Software Tool for the Hemodynamic Analysis of Cerebral Vascular Malformations Using 3D and 4D MRA Image Sequences
Abstract: Stroke is the second most common cause of death and major cause of disability worldwide. Approx. 20% of cerebral strokes are caused by hemorrhages due to rupture of cereb...
Nils Daniel Forkert, Dennis Säring, Jens Fieh...
RECOMB
2010
Springer
15 years 4 months ago
A Novel Abundance-Based Algorithm for Binning Metagenomic Sequences Using l-Tuples
Abstract. Metagenomics is the study of microbial communities sampled directly from their natural environment, without prior culturing. Among the computational tools recently develo...
Yu-Wei Wu, Yuzhen Ye
BMCBI
2010
111views more  BMCBI 2010»
14 years 10 months ago
Protein sequences classification by means of feature extraction with substitution matrices
Background: This paper deals with the preprocessing of protein sequences for supervised classification. Motif extraction is one way to address that task. It has been largely used ...
Rabie Saidi, Mondher Maddouri, Engelbert Mephu Ngu...