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» Sequence Complexity for Biological Sequence Analysis
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BMCBI
2002
81views more  BMCBI 2002»
14 years 9 months ago
Species-specific protein sequence and fold optimizations
Background: An organism's ability to adapt to its particular environmental niche is of fundamental importance to its survival and proliferation. In the largest study of its k...
Michel Dumontier, Katerina Michalickova, Christoph...
ICASSP
2011
IEEE
14 years 1 months ago
Evaluating music sequence models through missing data
Building models of the structure in musical signals raises the question of how to evaluate and compare different modeling approaches. One possibility is to use the model to impute...
Thierry Bertin-Mahieux, Graham Grindlay, Ron J. We...
APBC
2004
116views Bioinformatics» more  APBC 2004»
14 years 11 months ago
Structure-Function Relationship in DNA Sequence Recognition by Transcription Factors
Transcription factors play essential role in the gene regulation in higher organisms, binding to multiple target sequences and regulating multiple genes in a complex manner. In or...
Akinori Sarai, Samuel Selvaraj, M. Michael Gromiha...
BMCBI
2011
14 years 1 months ago
A user-friendly web portal for T-Coffee on supercomputers
Background: Parallel T-Coffee (PTC) was the first parallel implementation of the T-Coffee multiple sequence alignment tool. It is based on MPI and RMA mechanisms. Its purpose is t...
Josep Rius Torrento, Fernando Cores, Francesc Sols...
KDD
2009
ACM
132views Data Mining» more  KDD 2009»
15 years 10 months ago
Learning patterns in the dynamics of biological networks
Our dynamic graph-based relational mining approach has been developed to learn structural patterns in biological networks as they change over time. The analysis of dynamic network...
Chang Hun You, Lawrence B. Holder, Diane J. Cook