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» Sequence Database Search Using Jumping Alignments
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NAR
2008
122views more  NAR 2008»
14 years 10 months ago
EPGD: a comprehensive web resource for integrating and displaying eukaryotic paralog/paralogon information
Gene duplication is common in all three domains of life, especially in eukaryotic genomes. The duplicates provide new material for the action of evolutionary forces such as select...
Guohui Ding, Yan Sun, Hong Li, Zhen Wang, Haiwei F...
87
Voted
BMCBI
2007
152views more  BMCBI 2007»
14 years 10 months ago
Bioinformatic identification of novel putative photoreceptor specific cis-elements
Background: Cell specific gene expression is largely regulated by different combinations of transcription factors that bind cis-elements in the upstream promoter sequence. However...
Charles G. Danko, Vera A. McIlvain, Maochun Qin, B...
CIKM
2006
Springer
15 years 1 months ago
Maximizing the sustained throughput of distributed continuous queries
Monitoring systems today often involve continuous queries over streaming data, in a distributed collaborative system. The distribution of query operators over a network of process...
Ioana Stanoi, George A. Mihaila, Themis Palpanas, ...
73
Voted
ICPR
2010
IEEE
15 years 3 months ago
A Neurobiologically Motivated Stochastic Method for Analysis of Human Activities in Video
In this paper, we develop a neurobiologicallymotivated statistical method for video analysis that simultaneously searches the combined motion and form space in a concerted and efï...
Ricky Sethi, Amit Roy-Chowdhury
BCB
2010
156views Bioinformatics» more  BCB 2010»
14 years 5 months ago
Accelerating HMMER on GPUs by implementing hybrid data and task parallelism
Many biologically motivated problems are expressed as dynamic programming recurrences and are difficult to parallelize due to the intrinsic data dependencies in their algorithms. ...
Narayan Ganesan, Roger D. Chamberlain, Jeremy Buhl...