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» Sequence Database Search Using Jumping Alignments
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94
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NAR
1998
76views more  NAR 1998»
14 years 10 months ago
U-insertion/deletion Edited Sequence Database
Uridine insertion/deletion RNA editing is a posttranscriptional RNA modification occurring in the mitochondria of kinetoplastid protozoa. The U-insertion/ deletion Edited Sequence...
Larry Simpson, Shirley H. Wang, Otavio H. Thiemann...
81
Voted
IPPS
2006
IEEE
15 years 4 months ago
FPGA based architecture for DNA sequence comparison and database search
DNA sequence comparison is a computationally intensive problem, known widely since the competition for human DNA decryption. Database search for DNA sequence comparison is of grea...
Euripides Sotiriades, Christos Kozanitis, Apostolo...
BMCBI
2006
130views more  BMCBI 2006»
14 years 10 months ago
4SALE - A tool for synchronous RNA sequence and secondary structure alignment and editing
Background: In sequence analysis the multiple alignment builds the fundament of all proceeding analyses. Errors in an alignment could strongly influence all succeeding analyses an...
Philipp N. Seibel, Tobias Müller, Thomas Dand...
84
Voted
DILS
2006
Springer
15 years 1 months ago
An Extensible Light-Weight XML-Based Monitoring System for Sequence Databases
Life science researchers want biological information in their interest to become available to them as soon as possible. A monitoring system is a solution that relieves biologists f...
Dieter Van de Craen, Frank Neven, Kerstin Koch
103
Voted
BMCBI
2010
155views more  BMCBI 2010»
14 years 7 months ago
BrEPS: a flexible and automatic protocol to compute enzyme-specific sequence profiles for functional annotation
Background: Models for the simulation of metabolic networks require the accurate prediction of enzyme function. Based on a genomic sequence, enzymatic functions of gene products a...
Constantin Bannert, A. Welfle, C. aus dem Spring, ...