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» Sequence Database Search Using Jumping Alignments
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BMCBI
2008
87views more  BMCBI 2008»
15 years 3 months ago
Protein structure search and local structure characterization
Background: Structural similarities among proteins can provide valuable insight into their functional mechanisms and relationships. As the number of available three-dimensional (3...
Shih-Yen Ku, Yuh-Jyh Hu
PAAPP
2007
112views more  PAAPP 2007»
15 years 2 months ago
A study on video viewing behavior: application to movie trailer miner
In this paper, we present a study on video viewing behavior. Based on a well-suited Markovian model, we have developed a clustering algorithm called K-Models and inspired by the K...
Sylvain Mongy
SIGPRO
2008
104views more  SIGPRO 2008»
15 years 3 months ago
Macromolecular sequence analysis using multiwindow Gabor representations
Multiwindow Gabor representations highlight fingerprints suitable for indexing of macromolecules, based on their local periodic structures. This paper presents a technique for ana...
Nagesh K. Subbanna, Yehoshua Y. Zeevi
BMCBI
2010
106views more  BMCBI 2010»
15 years 3 months ago
Multiple structure alignment and consensus identification for proteins
Background: An algorithm is presented to compute a multiple structure alignment for a set of proteins and to generate a consensus (pseudo) protein which captures common substructu...
Ivaylo Ilinkin, Jieping Ye, Ravi Janardan
JMLR
2012
13 years 5 months ago
Active Clustering of Biological Sequences
Given a point set S and an unknown metric d on S, we study the problem of efficiently partitioning S into k clusters while querying few distances between the points. In our model...
Konstantin Voevodski, Maria-Florina Balcan, Heiko ...