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GCB
1998
Springer
112views Biometrics» more  GCB 1998»
15 years 7 months ago
Combining diverse evidence for gene recognition in completely sequenced bacterial genomes
Analysis of a newly sequenced bacterial genome starts with identification of protein-coding genes. Functional assignment of proteins requires the exact knowledge of protein N-term...
Dmitrij Frishman, Andrey A. Mironov, Hans-Werner M...
BMCBI
2008
121views more  BMCBI 2008»
15 years 3 months ago
iRefIndex: A consolidated protein interaction database with provenance
Background: Interaction data for a given protein may be spread across multiple databases. We set out to create a unifying index that would facilitate searching for these data and ...
Sabry Razick, George Magklaras, Ian M. Donaldson
BMCBI
2006
136views more  BMCBI 2006»
15 years 3 months ago
Java GUI for InterProScan (JIPS): A tool to help process multiple InterProScans and perform ortholog analysis
Background: Recent, rapid growth in the quantity of available genomic data has generated many protein sequences that are not yet biochemically classified. Thus, the prediction of ...
Aijazuddin Syed, Chris Upton
ICDE
2010
IEEE
288views Database» more  ICDE 2010»
16 years 3 months ago
Fast In-Memory XPath Search using Compressed Indexes
A large fraction of an XML document typically consists of text data. The XPath query language allows text search via the equal, contains, and starts-with predicates. Such predicate...
Diego Arroyuelo, Francisco Claude, Sebastian Manet...
CTRSA
2008
Springer
109views Cryptology» more  CTRSA 2008»
15 years 5 months ago
Super-Efficient Verification of Dynamic Outsourced Databases
We develop new algorithmic and cryptographic techniques for authenticating the results of queries over databases that are outsourced to an untrusted responder. We depart from previ...
Michael T. Goodrich, Roberto Tamassia, Nikos Trian...