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» Sequence Database Search Using Jumping Alignments
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BMCBI
2008
145views more  BMCBI 2008»
15 years 3 months ago
The contrasting properties of conservation and correlated phylogeny in protein functional residue prediction
Background: Amino acids responsible for structure, core function or specificity may be inferred from multiple protein sequence alignments where a limited set of residue types are ...
Jonathan R. Manning, Emily R. Jefferson, Geoffrey ...
CORR
2002
Springer
104views Education» more  CORR 2002»
15 years 3 months ago
Intelligent Search of Correlated Alarms for GSM Networks with Model-based Constraints
In order to control the process of data mining and focus on the things of interest to us, many kinds of constraints have been added into the algorithms of data mining. However, di...
Qingguo Zheng, Ke Xu, Weifeng Lv, Shilong Ma
BMCBI
2006
108views more  BMCBI 2006»
15 years 3 months ago
SPIDer: Saccharomyces protein-protein interaction database
Background: Since proteins perform their functions by interacting with one another and with other biomolecules, reconstructing a map of the protein-protein interactions of a cell,...
Xiaomei Wu, Lei Zhu, Jie Guo, Cong Fu, Hongjun Zho...
BMCBI
2006
249views more  BMCBI 2006»
15 years 3 months ago
Gene functional similarity search tool (GFSST)
Background: With the completion of the genome sequences of human, mouse, and other species and the advent of high throughput functional genomic research technologies such as biomi...
Peisen Zhang, Jinghui Zhang, Huitao Sheng, James J...
CIBCB
2009
IEEE
15 years 4 months ago
An application of the metric access methods to the mass spectrometry data
Mass spectrometry is a very popular method for protein and peptide identification nowadays. Abundance of data generated in this way grows exponentially every year and although ther...
Jiri Novák, David Hoksza