Sciweavers

32 search results - page 2 / 7
» Sequence alignment with tandem duplication
Sort
View
BMCBI
2006
150views more  BMCBI 2006»
14 years 9 months ago
CGAT: a comparative genome analysis tool for visualizing alignments in the analysis of complex evolutionary changes between clos
Background: The recent accumulation of closely related genomic sequences provides a valuable resource for the elucidation of the evolutionary histories of various organisms. Howev...
Ikuo Uchiyama, Toshio Higuchi, Ichizo Kobayashi
BMCBI
2008
125views more  BMCBI 2008»
14 years 9 months ago
Tandem duplication, circular permutation, molecular adaptation: how Solanaceae resist pests via inhibitors
Background: The Potato type II (Pot II) family of proteinase inhibitors plays critical roles in the defense system of plants from Solanaceae family against pests. To better unders...
Lesheng Kong, Shoba Ranganathan
CPM
2001
Springer
72views Combinatorics» more  CPM 2001»
15 years 2 months ago
Tandem Cyclic Alignment
We present a solution for the following problem. Given two sequences X = x1x2 · · · xn and Y = y1y2 · · · ym, n ≤ m, find the best scoring alignment of X = Xk [i] vs Y ove...
Gary Benson
ECIR
2010
Springer
14 years 11 months ago
BASIL: Effective Near-Duplicate Image Detection Using Gene Sequence Alignment
Abstract. Finding near-duplicate images is a task often found in Multimedia Information Retrieval (MIR). Toward this effort, we propose a novel idea by bridging two seemingly unrel...
Hung-sik Kim, Hau-Wen Chang, Jeongkyu Lee, Dongwon...
91
Voted
DLT
2006
14 years 11 months ago
Closure of Language Classes Under Bounded Duplication
Duplication is an operation generating a language from a single word by iterated application of rewriting rules u uu on factors. We extend this operation to entire languages and i...
Masami Ito, Peter Leupold, Kayoko Shikishima-Tsuji