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» Shape Distributions and Protein Similarity
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BMCBI
2011
14 years 6 months ago
Accurate statistics for local sequence alignment with position-dependent scoring by rare-event sampling
Background: Molecular database search tools need statistical models to assess the significance for the resulting hits. In the classical approach one asks the question how probable...
Stefan Wolfsheimer, Inke Herms, Sven Rahmann, Alex...
BMCBI
2010
201views more  BMCBI 2010»
14 years 12 months ago
Analysis of X-ray Structures of Matrix Metalloproteinases via Chaotic Map Clustering
Background: Matrix metalloproteinases (MMPs) are well-known biological targets implicated in tumour progression, homeostatic regulation, innate immunity, impaired delivery of pro-...
Ilenia Giangreco, Orazio Nicolotti, Angelo Carotti...
BMCBI
2010
151views more  BMCBI 2010»
14 years 12 months ago
Data reduction for spectral clustering to analyze high throughput flow cytometry data
Background: Recent biological discoveries have shown that clustering large datasets is essential for better understanding biology in many areas. Spectral clustering in particular ...
Habil Zare, Parisa Shooshtari, Arvind Gupta, Ryan ...
ICVGIP
2008
15 years 1 months ago
Automated Flower Classification over a Large Number of Classes
We investigate to what extent combinations of features can improve classification performance on a large dataset of similar classes. To this end we introduce a 103 class flower da...
Maria-Elena Nilsback, Andrew Zisserman
BMCBI
2006
166views more  BMCBI 2006»
14 years 11 months ago
Extraction of phylogenetic network modules from the metabolic network
Background: In bio-systems, genes, proteins and compounds are related to each other, thus forming complex networks. Although each organism has its individual network, some organis...
Takuji Yamada, Minoru Kanehisa, Susumu Goto