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» Shared Peptides in Mass Spectrometry Based Protein Quantific...
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BMCBI
2007
91views more  BMCBI 2007»
14 years 11 months ago
A mass accuracy sensitive probability based scoring algorithm for database searching of tandem mass spectrometry data
Background: Liquid chromatography coupled with tandem mass spectrometry (LC-MS/MS) has become one of the most used tools in mass spectrometry based proteomics. Various algorithms ...
Hua Xu, Michael A. Freitas
BMCBI
2008
126views more  BMCBI 2008»
14 years 11 months ago
NITPICK: peak identification for mass spectrometry data
Background: The reliable extraction of features from mass spectra is a fundamental step in the automated analysis of proteomic mass spectrometry (MS) experiments. Results: This co...
Bernhard Y. Renard, Marc Kirchner, Hanno Steen, Ju...
HAIS
2008
Springer
15 years 15 days ago
Clustering Likelihood Curves: Finding Deviations from Single Clusters
For systematic analyses of quantitative mass spectrometry data a method was developed in order to reveal peptides within a protein, that show differences in comparison with the rem...
Claudia Hundertmark, Frank Klawonn
BMCBI
2008
107views more  BMCBI 2008»
14 years 11 months ago
A machine learning approach to explore the spectra intensity pattern of peptides using tandem mass spectrometry data
Background: A better understanding of the mechanisms involved in gas-phase fragmentation of peptides is essential for the development of more reliable algorithms for high-throughp...
Cong Zhou, Lucas D. Bowler, Jianfeng Feng
95
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CIBCB
2009
IEEE
15 years 16 days ago
An application of the metric access methods to the mass spectrometry data
Mass spectrometry is a very popular method for protein and peptide identification nowadays. Abundance of data generated in this way grows exponentially every year and although ther...
Jiri Novák, David Hoksza