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BMCBI
2007
112views more  BMCBI 2007»
14 years 9 months ago
PFAAT version 2.0: A tool for editing, annotating, and analyzing multiple sequence alignments
Background: By virtue of their shared ancestry, homologous sequences are similar in their structure and function. Consequently, multiple sequence alignments are routinely used to ...
Daniel R. Caffrey, Paul H. Dana, Vidhya Mathur, Ma...
BMCBI
2008
99views more  BMCBI 2008»
14 years 9 months ago
Multiple organism algorithm for finding ultraconserved elements
Background: Ultraconserved elements are nucleotide or protein sequences with 100% identity (no mismatches, insertions, or deletions) in the same organism or between two or more or...
Scott Christley, Neil F. Lobo, Gregory R. Madey
BMCBI
2008
86views more  BMCBI 2008»
14 years 9 months ago
Subfamily specific conservation profiles for proteins based on n-gram patterns
Background: A new algorithm has been developed for generating conservation profiles that reflect the evolutionary history of the subfamily associated with a query sequence. It is ...
John K. Vries, Xiong Liu
CACM
2010
179views more  CACM 2010»
14 years 9 months ago
x86-TSO: a rigorous and usable programmer's model for x86 multiprocessors
Exploiting the multiprocessors that have recently become ubiquitous requires high-performance and reliable concurrent systems code, for concurrent data structures, operating syste...
Peter Sewell, Susmit Sarkar, Scott Owens, Francesc...
ECCC
2008
186views more  ECCC 2008»
14 years 9 months ago
Universal Semantic Communication II: A Theory of Goal-Oriented Communication
We continue the investigation of the task of meaningful communication among intelligent entities (players, agents) without any prior common language. Our generic thesis is that su...
Brendan Juba, Madhu Sudan