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CASES
2005
ACM
14 years 11 months ago
A post-compilation register reassignment technique for improving hamming distance code compression
Code compression is a field where compression ratios between compiler-generated code and subsequent compressed code are highly dependent on decisions made at compile time. Most op...
Montserrat Ros, Peter Sutton
SODA
2008
ACM
118views Algorithms» more  SODA 2008»
14 years 11 months ago
Geodesic Delaunay triangulation and witness complex in the plane
We introduce a new feature size for bounded domains in the plane endowed with an intrinsic metric. Given a point x in a domain X, the homotopy feature size of X at x measures half...
Jie Gao, Leonidas J. Guibas, Steve Oudot, Yue Wang
BMCBI
2008
202views more  BMCBI 2008»
14 years 9 months ago
Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data
Background: Integrating data from multiple global assays and curated databases is essential to understand the spatiotemporal interactions within cells. Different experiments measu...
Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
90
Voted
BMCBI
2010
108views more  BMCBI 2010»
14 years 9 months ago
An intuitionistic approach to scoring DNA sequences against transcription factor binding site motifs
Background: Transcription factors (TFs) control transcription by binding to specific regions of DNA called transcription factor binding sites (TFBSs). The identification of TFBSs ...
Fernando Garcia-Alcalde, Armando Blanco, Adrian J....
BMCBI
2010
243views more  BMCBI 2010»
14 years 9 months ago
Comparative study of unsupervised dimension reduction techniques for the visualization of microarray gene expression data
Background: Visualization of DNA microarray data in two or three dimensional spaces is an important exploratory analysis step in order to detect quality issues or to generate new ...
Christoph Bartenhagen, Hans-Ulrich Klein, Christia...