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» Similarity Measures for Categorical Data: A Comparative Eval...
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BMCBI
2007
140views more  BMCBI 2007»
13 years 6 months ago
Evaluation of high-throughput functional categorization of human disease genes
Background: Biological data that are well-organized by an ontology, such as Gene Ontology, enables high-throughput availability of the semantic web. It can also be used to facilit...
James L. Chen, Yang Liu, Lee T. Sam, Jianrong Li, ...
SSDBM
2010
IEEE
220views Database» more  SSDBM 2010»
13 years 10 months ago
Prefix Tree Indexing for Similarity Search and Similarity Joins on Genomic Data
Similarity search and similarity join on strings are important for applications such as duplicate detection, error detection, data cleansing, or comparison of biological sequences....
Astrid Rheinländer, Martin Knobloch, Nicky Ho...
FLAIRS
2011
12 years 9 months ago
Evaluating Semantic Metrics on Tasks of Concept Similarity
This study presents an evaluation of WordNet-based semantic similarity and relatedness measures in tasks focused on concept similarity. Assuming similarity as distinct from relate...
Hansen Andrew Schwartz, Fernando Gomez
DASFAA
2007
IEEE
240views Database» more  DASFAA 2007»
14 years 18 days ago
A Comparative Study of Ontology Based Term Similarity Measures on PubMed Document Clustering
Recent research shows that ontology as background knowledge can improve document clustering quality with its concept hierarchy knowledge. Previous studies take term semantic simila...
Xiaodan Zhang, Liping Jing, Xiaohua Hu, Michael K....
BMCBI
2008
170views more  BMCBI 2008»
13 years 6 months ago
Evaluation of GO-based functional similarity measures using S. cerevisiae protein interaction and expression profile data
Background: Researchers interested in analysing the expression patterns of functionally related genes usually hope to improve the accuracy of their results beyond the boundaries o...
Tao Xu, LinFang Du, Yan Zhou