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NAR
1998
86views more  NAR 1998»
15 years 1 months ago
Pfam: multiple sequence alignments and HMM-profiles of protein domains
Pfam contains multiple alignments and hidden Markov model based profiles (HMM-profiles) of complete protein domains. The definition of domain boundaries, family members and alignm...
Erik L. L. Sonnhammer, Sean R. Eddy, Ewan Birney, ...
VLDB
2003
ACM
147views Database» more  VLDB 2003»
16 years 2 months ago
RE-tree: an efficient index structure for regular expressions
Due to their expressive power, Regular Expressions (REs) are quickly becoming an integral part of language specifications for several important application scenarios. Many of thes...
Chee Yong Chan, Minos N. Garofalakis, Rajeev Rasto...
SIGMOD
2011
ACM
276views Database» more  SIGMOD 2011»
14 years 4 months ago
Schedule optimization for data processing flows on the cloud
Scheduling data processing workflows (dataflows) on the cloud is a very complex and challenging task. It is essentially an optimization problem, very similar to query optimizati...
Herald Kllapi, Eva Sitaridi, Manolis M. Tsangaris,...
CIKM
2008
Springer
15 years 3 months ago
A language for manipulating clustered web documents results
We propose a novel conception language for exploring the results retrieved by several internet search services (like search engines) that cluster retrieved documents. The goal is ...
Gloria Bordogna, Alessandro Campi, Giuseppe Psaila...
DEXAW
2006
IEEE
140views Database» more  DEXAW 2006»
15 years 8 months ago
String-Matching and Update through Algebraic Signatures in Scalable Distributed Data Structures
: Scalable Distributed Data Structures (SDDSs) store large scalable files over a distributed RAM of nodes in a grid or a P2P network. The files scale transparently for the applicat...
Riad Mokadem, Witold Litwin