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» Similarity Searching in Peer-to-Peer Databases
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BMCBI
2007
166views more  BMCBI 2007»
15 years 2 months ago
Optimization of filtering criterion for SEQUEST database searching to improve proteome coverage in shotgun proteomics
Background: In proteomic analysis, MS/MS spectra acquired by mass spectrometer are assigned to peptides by database searching algorithms such as SEQUEST. The assignations of pepti...
Xinning Jiang, Xiaogang Jiang, Guanghui Han, Mingl...
SSDBM
2008
IEEE
149views Database» more  SSDBM 2008»
15 years 8 months ago
Query Planning for Searching Inter-dependent Deep-Web Databases
Increasingly, many data sources appear as online databases, hidden behind query forms, thus forming what is referred to as the deep web. It is desirable to have systems that can pr...
Fan Wang, Gagan Agrawal, Ruoming Jin
ICARCV
2002
IEEE
166views Robotics» more  ICARCV 2002»
15 years 7 months ago
Similarity measure determination from NURBS-warping method
With the advances in digital imagery, large accessible data storage, internet repositories, and image applications, information conveyed through images is gaining in importance. T...
Kim Meng Liang, Mandava Rajeswari, Bee Ee Khoo
BMCBI
2008
123views more  BMCBI 2008»
15 years 2 months ago
Shape based indexing for faster search of RNA family databases
Background: Most non-coding RNA families exert their function by means of a conserved, common secondary structure. The Rfam data base contains more than five hundred structurally ...
Stefan Janssen, Jens Reeder, Robert Giegerich
BMCBI
2006
172views more  BMCBI 2006»
15 years 2 months ago
A novel scoring schema for peptide identification by searching protein sequence databases using tandem mass spectrometry data
Background: Tandem mass spectrometry (MS/MS) is a powerful tool for protein identification. Although great efforts have been made in scoring the correlation between tandem mass sp...
Zhuo Zhang, Shiwei Sun, Xiaopeng Zhu, Suhua Chang,...