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BMCBI
2008
110views more  BMCBI 2008»
14 years 10 months ago
Enhancing the prediction of protein pairings between interacting families using orthology information
Background: It has repeatedly been shown that interacting protein families tend to have similar phylogenetic trees. These similarities can be used to predicting the mapping betwee...
José M. G. Izarzugaza, David de Juan, Carle...
CAV
2009
Springer
215views Hardware» more  CAV 2009»
15 years 10 months ago
Homer: A Higher-Order Observational Equivalence Model checkER
We present HOMER, an observational-equivalence model checker for the 3rd-order fragment of Idealized Algol (IA) augmented with iteration. It works by first translating terms of the...
David Hopkins, C.-H. Luke Ong
ICFP
2004
ACM
15 years 10 months ago
Types, potency, and idempotency: why nonlinearity and amnesia make a type system work
Useful type inference must be faster than normalization. Otherwise, you could check safety conditions by running the program. We analyze the relationship between bounds on normali...
Harry G. Mairson, Peter Møller Neergaard
OOPSLA
2010
Springer
14 years 8 months ago
Efficient modular glass box software model checking
Glass box software model checking incorporates novel techniques to identify similarities in the state space of a model checker and safely prune large numbers of redundant states w...
Michael Roberson, Chandrasekhar Boyapati
JAR
2010
95views more  JAR 2010»
14 years 4 months ago
Equivariant Unification
Nominal logic is a variant of first-order logic with special facilities for reasoning about names and binding based on the underlying concepts of swapping and freshness. It serves ...
James Cheney