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BMCBI
2010
102views more  BMCBI 2010»
14 years 10 months ago
Missing genes in the annotation of prokaryotic genomes
Background: Protein-coding gene detection in prokaryotic genomes is considered a much simpler problem than in intron-containing eukaryotic genomes. However there have been reports...
Andrew S. Warren, Jeremy S. Archuleta, Wu-chun Fen...
BMCBI
2008
259views more  BMCBI 2008»
14 years 10 months ago
DISCLOSE : DISsection of CLusters Obtained by SEries of transcriptome data using functional annotations and putative transcripti
Background: A typical step in the analysis of gene expression data is the determination of clusters of genes that exhibit similar expression patterns. Researchers are confronted w...
Evert-Jan Blom, Sacha A. F. T. van Hijum, Klaas J....
BMCBI
2007
113views more  BMCBI 2007»
14 years 10 months ago
PILER-CR: Fast and accurate identification of CRISPR repeats
Background: Sequencing of prokaryotic genomes has recently revealed the presence of CRISPR elements: short, highly conserved repeats separated by unique sequences of similar lengt...
Robert C. Edgar
ENTCS
2006
136views more  ENTCS 2006»
14 years 10 months ago
Classically-controlled Quantum Computation
It is reasonable to assume that quantum computations take place under the control of the classical world. For modelling this standard situation, we introduce a Classically-control...
Simon Perdrix, Philippe Jorrand
ICLP
2009
Springer
15 years 10 months ago
A Tabling Implementation Based on Variables with Multiple Bindings
Suspension-based tabling systems have to save and restore computation states belonging to OR branches. Stack freezing combined with (forward) trailing is among the better-known imp...
Pablo Chico de Guzmán, Manuel Carro, Manuel...