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JCB
2002
111views more  JCB 2002»
14 years 9 months ago
A General Edit Distance between RNA Structures
Arc-annotated sequences are useful in representing the structural information of RNA sequences. In general, RNA secondary and tertiary structures can be represented as a set of ne...
Tao Jiang, Guohui Lin, Bin Ma, Kaizhong Zhang
MP
2002
84views more  MP 2002»
14 years 9 months ago
The volume algorithm revisited: relation with bundle methods
We revise the Volume Algorithm (VA) for linear programming and relate it to bundle methods. When first introduced, VA was presented as a subgradient-like method for solving the ori...
Laura Bahiense, Nelson Maculan, Claudia A. Sagasti...
NAR
1998
161views more  NAR 1998»
14 years 9 months ago
Touring protein fold space with Dali/FSSP
The FSSP database and its new supplement, the Dali Domain Dictionary, present a continuously updated classification of all known 3D protein structures. The classification is deriv...
Liisa Holm, Chris Sander
PE
2002
Springer
109views Optimization» more  PE 2002»
14 years 9 months ago
Load-dependent service queues with application to congestion control in broadband networks
: We analyze D/G/1 and M/G/1 queues where the service time for an arrival depends on the amount of work in the system upon arrival. The models are motivated by the bit dropping met...
Kin K. Leung
IJPP
2008
158views more  IJPP 2008»
14 years 9 months ago
The ParTriCluster Algorithm for Gene Expression Analysis
Analyzing gene expression patterns is becoming a highly relevant task in the Bioinformatics area. This analysis makes it possible to determine the behavior patterns of genes under...
Renata Braga Araújo, Guilherme Henrique Tri...