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DAC
2006
ACM
15 years 10 months ago
BoxRouter: a new global router based on box expansion and progressive ILP
In this paper, we propose a new global router, BoxRouter, powered by the concept of box expansion and progressive integer linear programming (ILP). BoxRouter first uses a simple P...
Minsik Cho, David Z. Pan
SIGSOFT
2008
ACM
15 years 10 months ago
Semi-automating small-scale source code reuse via structural correspondence
Developers perform small-scale reuse tasks to save time and to increase the quality of their code, but due to their small scale, the costs of such tasks can quickly outweigh their...
Rylan Cottrell, Robert J. Walker, Jörg Denzin...
RECOMB
2006
Springer
15 years 10 months ago
A Parsimony Approach to Genome-Wide Ortholog Assignment
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving various...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...
SODA
2010
ACM
189views Algorithms» more  SODA 2010»
15 years 7 months ago
Correlation Clustering with Noisy Input
Correlation clustering is a type of clustering that uses a basic form of input data: For every pair of data items, the input specifies whether they are similar (belonging to the s...
Claire Mathieu, Warren Schudy
ISPASS
2010
IEEE
15 years 4 months ago
Visualizing complex dynamics in many-core accelerator architectures
—While many-core accelerator architectures, such as today’s Graphics Processing Units (GPUs), offer orders of magnitude more raw computing power than contemporary CPUs, their m...
Aaron Ariel, Wilson W. L. Fung, Andrew E. Turner, ...