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MFCS
2005
Springer
15 years 3 months ago
Interactive Algorithms 2005
A sequential algorithm just follows its instructions and thus cannot make a nondeterministic choice all by itself, but it can be instructed to solicit outside help to make a choic...
Yuri Gurevich
IPPS
2006
IEEE
15 years 4 months ago
Bio-sequence database scanning on a GPU
Protein sequences with unknown functionality are often compared to a set of known sequences to detect functional similarities. Efficient dynamic programming algorithms exist for t...
Weiguo Liu, Bertil Schmidt, Gerrit Voss, Adrian Sc...
NAR
2007
136views more  NAR 2007»
14 years 9 months ago
DBAli tools: mining the protein structure space
The DBAli tools use a comprehensive set of structural alignments in the DBAli database to leverage the structural information deposited in the Protein Data Bank (PDB). These tools...
Marc A. Martí-Renom, Ursula Pieper, Mallur ...
ICML
2007
IEEE
15 years 10 months ago
Structural alignment based kernels for protein structure classification
Structural alignments are the most widely used tools for comparing proteins with low sequence similarity. The main contribution of this paper is to derive various kernels on prote...
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, ...
ASM
2008
ASM
14 years 12 months ago
On the Purpose of Event-B Proof Obligations
Event-B is a formal modelling method which is claimed to be suitable for diverse modelling domains, such as reactive systems and sequential program development. This claim hinges o...
Stefan Hallerstede