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» Similarity of Event Sequences
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111
Voted
BMCBI
2008
189views more  BMCBI 2008»
15 years 26 days ago
AnEnPi: identification and annotation of analogous enzymes
Background: Enzymes are responsible for the catalysis of the biochemical reactions in metabolic pathways. Analogous enzymes are able to catalyze the same reactions, but they prese...
Thomas D. Otto, Ana Carolina R. Guimarães, ...
115
Voted
BMCBI
2006
127views more  BMCBI 2006»
15 years 24 days ago
Construction of phylogenetic trees by kernel-based comparative analysis of metabolic networks
Background: To infer the tree of life requires knowledge of the common characteristics of each species descended from a common ancestor as the measuring criteria and a method to c...
Sok June Oh, Je-Gun Joung, Jeong Ho Chang, Byoung-...
BMCBI
2011
14 years 7 months ago
Estimating developmental states of tumors and normal tissues using a linear time-ordered model
Background: Tumor cells are considered to have an aberrant cell state, and some evidence indicates different development states appearing in the tumorigenesis. Embryonic developme...
Bo Zhang, Beibei Chen, Tao Wu, Zhenyu Xuan, Xiaope...
BMCBI
2005
123views more  BMCBI 2005»
15 years 20 days ago
PSI-BLAST-ISS: an intermediate sequence search tool for estimation of the position-specific alignment reliability
Background: Protein sequence alignments have become indispensable for virtually any evolutionary, structural or functional study involving proteins. Modern sequence search and com...
Mindaugas Margelevicius, Ceslovas Venclovas
ECAI
2008
Springer
15 years 2 months ago
Learning Functional Object-Categories from a Relational Spatio-Temporal Representation
Abstract. We propose a framework that learns functional objectes from spatio-temporal data sets such as those abstracted from video. The data is represented as one activity graph t...
Muralikrishna Sridhar, Anthony G. Cohn, David C. H...