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» Simple Randomized Algorithms for Closest Pair Problems
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BMCBI
2008
115views more  BMCBI 2008»
14 years 9 months ago
PARPST: a PARallel algorithm to find peptide sequence tags
Background: Protein identification is one of the most challenging problems in proteomics. Tandem mass spectrometry provides an important tool to handle the protein identification ...
Sara Brunetti, Elena Lodi, Elisa Mori, Maria Stell...
STOC
2003
ACM
90views Algorithms» more  STOC 2003»
15 years 10 months ago
Work-competitive scheduling for cooperative computing with dynamic groups
The problem of cooperatively performing a set of t tasks in a decentralized setting where the computing medium is subject to failures is one of the fundamental problems in distrib...
Chryssis Georgiou, Alexander Russell, Alexander A....
ALENEX
2009
106views Algorithms» more  ALENEX 2009»
14 years 11 months ago
Drawing Binary Tanglegrams: An Experimental Evaluation
A tanglegram is a pair of trees whose leaf sets are in oneto-one correspondence; matching leaves are connected by inter-tree edges. In applications such as phylogenetics or hierar...
Martin Nöllenburg, Markus Völker, Alexan...
IEEESCC
2009
IEEE
14 years 7 months ago
Theoretical Framework for Eliminating Redundancy in Workflows
In this paper we look at combining and compressing a set of workflows, such that computation can be minimized. In this context, we look at two novel theoretical problems with appl...
Dhrubajyoti Saha, Abhishek Samanta, Smruti R. Sara...
SODA
1998
ACM
99views Algorithms» more  SODA 1998»
14 years 11 months ago
Online Throughput-Competitive Algorithm for Multicast Routing and Admission Control
We present the first polylog-competitive online algorithm for the general multicast admission control and routing problem in the throughput model. The ratio of the number of reque...
Ashish Goel, Monika Rauch Henzinger, Serge A. Plot...