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RECOMB
2002
Springer
15 years 10 months ago
Simulating a Coalescent Process with Recombination and Ascertainment
A new method is presented for use in simulating samples of disease and normal chromosomes bearing multiple linked genetic markers under a neutral model of mutation, genetic drift, ...
Ying Wang, Bruce Rannala
IPPS
2005
IEEE
15 years 3 months ago
COTS Clusters vs. the Earth Simulator: An Application Study Using IMPACT-3D
In 2002, Japan announced the Earth Simulator—a supercomputer based on low-volume vector processors and a custom network—and reported that computational scientists had used it ...
Daniel G. Chavarría-Miranda, Guohua Jin, Jo...
GI
2009
Springer
15 years 2 months ago
Massively-Parallel Simulation of Biochemical Systems
: Understanding biological evolution prompts for a detailed understanding of the realized phenotype. Biochemical and gene regulatory dynamics are a cornerstone for the physiology o...
Jens Ackermann, Paul Baecher, Thorsten Franzel, Mi...
JCC
2006
82views more  JCC 2006»
14 years 9 months ago
Monte Carlo simulations of biomolecules: The MC module in CHARMM
: We describe the implementation of a general and flexible Monte Carlo (MC) module for the program CHARMM, which is used widely for modeling biomolecular systems with empirical ene...
Jie Hu, Ao Ma, Aaron R. Dinner
SPRINGSIM
2008
14 years 11 months ago
Implementation by simulation; strategies for ultrasound screening for hip dysplasia in the Netherlands
Background: Implementation of medical interventions may vary with organization and available capacity. The influence of this source of variability on the cost-effectiveness can be...
Sabrina Ramwadhdoebe, Godefridus G. van Merode, Ma...