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GI
2009
Springer
14 years 11 months ago
Implementation of an effective non-bonded interactions kernel for biomolecular simulations on the Cell processor
Abstract: In biomolecular simulations intensive computations are spent in nonbonded interactions kernels, i.e., electrostatic interactions. Therefore this part can be considered as...
Horacio Emilio Pérez Sánchez, Wolfga...
116
Voted
CORR
2010
Springer
105views Education» more  CORR 2010»
14 years 11 months ago
On Designing Multicore-aware Simulators for Biological Systems
The stochastic simulation of biological systems is an increasingly popular technique in bioinformatics. It often is an enlightening technique, which may however result in being com...
Marco Aldinucci, Mario Coppo, Ferruccio Damiani, M...
115
Voted
ASPDAC
2012
ACM
288views Hardware» more  ASPDAC 2012»
13 years 9 months ago
Automatic timing granularity adjustment for host-compiled software simulation
—Host-compiled simulation has been widely adopted as a practical approach for fast and high-level evaluation of complex software-intensive systems at early stages of the design p...
Parisa Razaghi, Andreas Gerstlauer
DAC
2008
ACM
16 years 2 months ago
Multiprocessor performance estimation using hybrid simulation
With the growing number of programmable processing elements in today's MultiProcessor System-on-Chip (MPSoC) designs, the synergy required for the development of the hardware...
Lei Gao, Kingshuk Karuri, Stefan Kraemer, Rainer L...
ANSS
2005
IEEE
15 years 7 months ago
J-Sim: A Simulation Environment for Wireless Sensor Networks
Wireless Sensor Networks (WSNs) have gained considerable attention in the past few years. As such, there has been an increasing need for defining and developing simulation framew...
Ahmed Sobeih, Wei-Peng Chen, Jennifer C. Hou, Lu-C...