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DEXAW
2010
IEEE
181views Database» more  DEXAW 2010»
15 years 1 months ago
Towards a Search System for the Web Exploiting Spatial Data of a Web Document
In this paper, we describe our work in progress in the scope of information retrieval exploiting the spatial data extracted from web documents. We discuss problems of a search for ...
Stefan Dlugolinsky, Michal Laclavik, Ladislav Hluc...
81
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BIOINFORMATICS
2010
127views more  BIOINFORMATICS 2010»
15 years 24 days ago
Analyzing taxonomic classification using extensible Markov models
Motivation: As next generation sequencing is rapidly adding new genomes, their correct placement in the taxonomy needs verification. However, the current methods for confirming cl...
Rao M. Kotamarti, Michael Hahsler, Douglas Raiford...
BMCBI
2008
130views more  BMCBI 2008»
15 years 23 days ago
A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
Background: The most common substitution matrices currently used (BLOSUM and PAM) are based on protein sequences with average amino acid distributions, thus they do not represent ...
Kevin Brick, Elisabetta Pizzi
103
Voted
BMCBI
2008
125views more  BMCBI 2008»
15 years 23 days ago
SynteBase/SynteView: a tool to visualize gene order conservation in prokaryotic genomes
Background: It has been repeatedly observed that gene order is rapidly lost in prokaryotic genomes. However, persistent synteny blocks are found when comparing more or less distan...
Frédéric Lemoine, Bernard Labedan, O...
89
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BMCBI
2007
123views more  BMCBI 2007»
15 years 20 days ago
BIRCH: A user-oriented, locally-customizable, bioinformatics system
Background: Molecular biologists need sophisticated analytical tools which often demand extensive computational resources. While finding, installing, and using these tools can be ...
Brian Fristensky