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ISMB
1998
15 years 6 months ago
Modeling Protein Homopolymeric Repeats: Possible Polyglutamine Structural Motifs for Huntington's Disease
Wedescribe a prototype system (Poly-X) for assisting an expert user in modelingprotein repeats. Poly-X reduces the large numberof degrees of freedomrequired to specify a protein m...
Richard H. Lathrop, Malcolm S. Casale, Douglas J. ...
JMLR
2006
125views more  JMLR 2006»
15 years 5 months ago
Linear Programming Relaxations and Belief Propagation - An Empirical Study
The problem of finding the most probable (MAP) configuration in graphical models comes up in a wide range of applications. In a general graphical model this problem is NP hard, bu...
Chen Yanover, Talya Meltzer, Yair Weiss
SC
2009
ACM
16 years 5 days ago
Highly scalable genome assembly on campus grids
Bioinformatics researchers need efficient means to process large collections of sequence data. One application of interest, genome assembly, has great potential for parallelizati...
Christopher Moretti, Michael Olson, Scott J. Emric...
CASES
2003
ACM
15 years 10 months ago
Encryption overhead in embedded systems and sensor network nodes: modeling and analysis
Recent research in sensor networks has raised issues of security for small embedded devices. Security concerns are motivated by the deployment of a large number of sensory devices...
Ramnath Venugopalan, Prasanth Ganesan, Pushkin Ped...
COLT
2001
Springer
15 years 10 months ago
Limitations of Learning via Embeddings in Euclidean Half-Spaces
The notion of embedding a class of dichotomies in a class of linear half spaces is central to the support vector machines paradigm. We examine the question of determining the mini...
Shai Ben-David, Nadav Eiron, Hans-Ulrich Simon