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CLUSTER
2003
IEEE
15 years 9 months ago
A Cluster-Based Solution for High Performance Hmmpfam Using EARTH Execution Model
Hmmpfam is a widely used computation-intensive bioinformatics software for sequence classification. The contribution of this paper is the first largely scalable and robust clust...
Weirong Zhu, Yanwei Niu, Jizhu Lu, Chuan Shen, Gua...
155
Voted
WOB
2004
120views Bioinformatics» more  WOB 2004»
15 years 5 months ago
Reconfigurable Systems for Sequence Alignment and for General Dynamic Programming
ABSTRACT. Reconfigurable systolic arrays can be adapted to efficiently resolve a wide spectrum of computational problems; parallelism is naturally explored in systolic arrays and r...
Ricardo P. Jacobi, Mauricio Ayala-Rincón, L...
CHI
2010
ACM
15 years 10 months ago
Example-centric programming: integrating web search into the development environment
The ready availability of online source code examples has changed the cost structure of programming by example modification. However, current search tools are wholly separate from...
Joel Brandt, Mira Dontcheva, Marcos Weskamp, Scott...
141
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CBSE
2007
Springer
15 years 9 months ago
Soya: A Programming Model and Runtime Environment for Component Composition Using SSDL
Abstract. The SOAP Service Description Language (SSDL) is a SOAPcentric language for describing Web Service contracts. SSDL focuses on abstraction as the building block for creatin...
Patric Fornasier, Jim Webber, Ian Gorton
121
Voted
SAS
2007
Springer
126views Formal Methods» more  SAS 2007»
15 years 9 months ago
Hierarchical Pointer Analysis for Distributed Programs
We present a new pointer analysis for use in shared memory programs running on hierarchical parallel machines. The analysis is motivated by the partitioned global address space lan...
Amir Kamil, Katherine A. Yelick