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» Software Tools for Performance Modeling of Parallel Programs
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AVI
2004
15 years 4 months ago
Visualizing programs with Jeliot 3
We present a program visualization tool called Jeliot 3 that is designed to aid novice students to learn procedural and object oriented programming. The key feature of Jeliot is t...
Andrés Moreno, Niko Myller, Erkki Sutinen, ...
BMCBI
2010
198views more  BMCBI 2010»
15 years 3 months ago
ClustalXeed: a GUI-based grid computation version for high performance and terabyte size multiple sequence alignment
Background: There is an increasing demand to assemble and align large-scale biological sequence data sets. The commonly used multiple sequence alignment programs are still limited...
Taeho Kim, Hyun Joo
PLDI
1995
ACM
15 years 6 months ago
Improving Balanced Scheduling with Compiler Optimizations that Increase Instruction-Level Parallelism
Traditional list schedulers order instructions based on an optimistic estimate of the load latency imposed by the hardware and therefore cannot respond to variations in memory lat...
Jack L. Lo, Susan J. Eggers
PDP
2005
IEEE
15 years 8 months ago
A Comparison Study of the HLRC-DU Protocol versus a HLRC Hardware Assisted Protocol
SVM systems are a cheaper and flexible way to implement the shared memory programming paradigm. Their huge flexibility is due to their software implementation; however, this is al...
Salvador Petit, Julio Sahuquillo, Ana Pont
BMCBI
2010
149views more  BMCBI 2010»
15 years 3 months ago
RuleMonkey: software for stochastic simulation of rule-based models
Background: The system-level dynamics of many molecular interactions, particularly protein-protein interactions, can be conveniently represented using reaction rules, which can be...
Joshua Colvin, Michael I. Monine, Ryan N. Gutenkun...