Sciweavers

729 search results - page 5 / 146
» Solving subgraph isomorphism problems with constraint progra...
Sort
View
JCB
2007
118views more  JCB 2007»
14 years 9 months ago
Discovering Topological Motifs Using a Compact Notation
Discovering topological motifs or common topologies in one or more graphs is an important as well as an interesting problem. It had been classically viewed as the subgraph isomorp...
Laxmi Parida
FOCS
2007
IEEE
15 years 3 months ago
Can you beat treewidth?
: It is well-known that constraint satisfaction problems (CSP) over an unbounded domain can be solved in time nO(k) if the treewidth of the primal graph of the instance is at most ...
Dániel Marx
WABI
2001
Springer
142views Bioinformatics» more  WABI 2001»
15 years 1 months ago
Pattern Matching and Pattern Discovery Algorithms for Protein Topologies
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
Juris Viksna, David Gilbert
ALGORITHMICA
2008
115views more  ALGORITHMICA 2008»
14 years 9 months ago
Algorithm Engineering for Color-Coding with Applications to Signaling Pathway Detection
Color-coding is a technique to design fixed-parameter algorithms for several NP-complete subgraph isomorphism problems. Somewhat surprisingly, not much work has so far been spent ...
Falk Hüffner, Sebastian Wernicke, Thomas Zich...
EXPCS
2007
15 years 1 months ago
Performance testing of combinatorial solvers with isomorph class instances
Combinatorial optimization problems expressed as Boolean constraint satisfaction problems (BCSPs) arise in several contexts, ranging from the classical unate set-packing problems ...
Franc Brglez, Jason A. Osborne