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CIKM
2008
Springer
15 years 6 months ago
A new method for indexing genomes using on-disk suffix trees
We propose a new method to build persistent suffix trees for indexing the genomic data. Our algorithm DiGeST (Disk-Based Genomic Suffix Tree) improves significantly over previous ...
Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upt...
ALENEX
2009
191views Algorithms» more  ALENEX 2009»
15 years 5 months ago
Theory and Practise of Monotone Minimal Perfect Hashing
Minimal perfect hash functions have been shown to be useful to compress data in several data management tasks. In particular, order-preserving minimal perfect hash functions [10] ...
Djamal Belazzougui, Paolo Boldi, Rasmus Pagh, Seba...
106
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PSB
2008
15 years 5 months ago
Integration of Microarray and Textual Data Improves the Prognosis Prediction of Breast, Lung, and Ovarian Cancer Patients
bstracts in the structure prior of a Bayesian network could improve the prediction of the prognosis in cancer. Our results show that prediction of the outcome with the text prior w...
O. Gaevert, Steven Van Vooren, Bart De Moor
ILP
2005
Springer
15 years 9 months ago
Classifying Relational Data with Neural Networks
We introduce a novel method for relational learning with neural networks. The contributions of this paper are threefold. First, we introduce the concept of relational neural networ...
Werner Uwents, Hendrik Blockeel
BMCBI
2007
227views more  BMCBI 2007»
15 years 4 months ago
Growing functional modules from a seed protein via integration of protein interaction and gene expression data
Background: Nowadays modern biology aims at unravelling the strands of complex biological structures such as the protein-protein interaction (PPI) networks. A key concept in the o...
Ioannis A. Maraziotis, Konstantina Dimitrakopoulou...