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» Source Coding Scheme for Multiple Sequence Alignments
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CIC
2006
121views Communications» more  CIC 2006»
15 years 1 months ago
Performance Studies of a Coding Scheme for a Slepian-Wolf Source Network
- We investigate the simplest Slepian-Wolf source network, consisting of an information source correlated with a second source used as a side-information for the decoder but not th...
Azizuddin Abdul Aziz, John C. Kieffer
BMCBI
2011
14 years 3 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes
ICASSP
2011
IEEE
14 years 3 months ago
Analog joint source-channel Multiple Description coding scheme over AWGN parallel channels
We propose a low complexity analog joint source channel coding Multiple Description (MD) scheme for transmitting the symbols of a Gaussian source across a pair of independent AWGN...
Aitor Erdozain, Pedro M. Crespo, Baltasar Beferull...
DCC
2008
IEEE
15 years 11 months ago
Noise-Shaped Predictive Coding for Multiple Descriptions of a Colored Gaussian Source
It was recently shown that the symmetric multiple-description (MD) quadratic rate-distortion function for memoryless Gaussian sources and two descriptions can be achieved by dithe...
Jan Østergaard, Ram Zamir, Yuval Kochman
BMCBI
2010
104views more  BMCBI 2010»
14 years 11 months ago
Parameters for accurate genome alignment
Background: Genome sequence alignments form the basis of much research. Genome alignment depends on various mundane but critical choices, such as how to mask repeats and which sco...
Martin C. Frith, Michiaki Hamada, Paul Horton