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    » Source Coding Scheme for Multiple Sequence Alignments
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    TCBB
    2008
    120views more  TCBB 2008»
    Learning Scoring Schemes for Sequence Alignment from Partial Examples
    13 years 6 months ago
    Learning Scoring Schemes for Sequence Alignment from Partial Examples
    Download  www.cs.arizona.edu
    When aligning biological sequences, the choice of scoring scheme is critical. Even small changes in gap penalties, for example, can yield radically different alignments. A rigorous...
    Eagu Kim, John D. Kececioglu
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    BMCBI
    2007
    107views more  BMCBI 2007»
    Progressive multiple sequence alignments from triplets
    13 years 6 months ago
    Progressive multiple sequence alignments from triplets
    Download  www.bioinf.uni-leipzig.de
    Motivation: The quality of progressive sequence alignments strongly depends on the accuracy of the individual pairwise alignment steps since gaps that are introduced at one step c...
    Matthias Kruspe, Peter F. Stadler
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    BMCBI
    2005
    142views more  BMCBI 2005»
    transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences
    13 years 6 months ago
    transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences
    Download  www.biomedcentral.com
    Background: Alignments of homologous DNA sequences are crucial for comparative genomics and phylogenetic analysis. However, multiple alignment represents a computationally difficu...
    Olaf R. P. Bininda-Emonds
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    BMCBI
    2010
    103views more  BMCBI 2010»
    MTRAP: Pairwise sequence alignment algorithm by a new measure based on transition probability between two consecutive pairs of r
    13 years 6 months ago
    MTRAP: Pairwise sequence alignment algorithm by a new measure based on transition probability between two consecutive pairs of r
    Download  www.biomedcentral.com
    Background: Sequence alignment is one of the most important techniques to analyze biological systems. It is also true that the alignment is not complete and we have to develop it ...
    Toshihide Hara, Keiko Sato, Masanori Ohya
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    JDCTA
    2010
    108views more  JDCTA 2010»
    Optimization Multiple Sequence Alignment Scheme in DC-BTA
    13 years 1 months ago
    Optimization Multiple Sequence Alignment Scheme in DC-BTA
    Download  www.aicit.org
    Zhanmao Cao, Jianchao Tang, Shizhong Jiang, Huixua...
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