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» Spatio-Temporal Alignment of Sequences
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NAR
2006
134views more  NAR 2006»
15 years 1 months ago
The MPI Bioinformatics Toolkit for protein sequence analysis
The MPI Bioinformatics Toolkit is an interactive web service which offers access to a great variety of public and in-house bioinformatics tools. They are grouped into different se...
Andreas Biegert, Christian Mayer, Michael Remmert,...
WABI
2009
Springer
142views Bioinformatics» more  WABI 2009»
15 years 8 months ago
Back-Translation for Discovering Distant Protein Homologies
Background: Frameshift mutations in protein-coding DNA sequences produce a drastic change in the resulting protein sequence, which prevents classic protein alignment methods from ...
Marta Gîrdea, Laurent Noé, Gregory Ku...
BMCBI
2007
233views more  BMCBI 2007»
15 years 1 months ago
160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA)
Background: To infer homology and subsequently gene function, the Smith-Waterman (SW) algorithm is used to find the optimal local alignment between two sequences. When searching s...
Isaac T. S. Li, Warren Shum, Kevin Truong
ICPR
2006
IEEE
16 years 2 months ago
Change detection in streetscapes from GPS coordinated omni-directional image sequences
As part of ITS technology, to achieve quick map updates, we propose a method for automatically detecting changes in streetscapes from images captured by car-mounted omnidirectiona...
Hiroshi Murase, Ichiro Ide, Junji Sato, Tomokazu T...
LATA
2010
Springer
15 years 6 months ago
A Randomized Numerical Aligner (rNA)
With the advent of new sequencing technologies able to produce an enormous quantity of short genomic sequences, new tools able to search for them inside a references sequence genom...
Alberto Policriti, Alexandru I. Tomescu, Francesco...