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BMCBI
2011
14 years 11 months ago
PileLine: a toolbox to handle genome position information in next-generation sequencing studies
Background: Genomic position (GP) files currently used in next-generation sequencing (NGS) studies are always difficult to manipulate due to their huge size and the lack of approp...
Daniel Glez-Peña, Gonzalo Gómez-L&oa...
FUN
2010
Springer
312views Algorithms» more  FUN 2010»
15 years 9 months ago
On Table Arrangements, Scrabble Freaks, and Jumbled Pattern Matching
Given a string s, the Parikh vector of s, denoted p(s), counts the multiplicity of each character in s. Searching for a match of Parikh vector q (a “jumbled string”) in the tex...
Peter Burcsi, Ferdinando Cicalese, Gabriele Fici, ...
PARA
2000
Springer
15 years 7 months ago
JavaGrande - High Performance Computing with Java
The JavaGrande Forum is a group of users, researchers, and interested parties from industry. The Forum members are either trying to use Java for resource-intensive applications or ...
Michael Philippsen, Ronald F. Boisvert, Vladimir G...
IMC
2007
ACM
15 years 5 months ago
I tube, you tube, everybody tubes: analyzing the world's largest user generated content video system
User Generated Content (UGC) is re-shaping the way people watch video and TV, with millions of video producers and consumers. In particular, UGC sites are creating new viewing pat...
Meeyoung Cha, Haewoon Kwak, Pablo Rodriguez, Yong-...
BMCBI
2008
146views more  BMCBI 2008»
15 years 4 months ago
EST Express: PHP/MySQL based automated annotation of ESTs from expression libraries
Background: Several biological techniques result in the acquisition of functional sets of cDNAs that must be sequenced and analyzed. The emergence of redundant databases such as U...
Robin P. Smith, William J. Buchser, Marcus B. Lemm...
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